There is new sequence conversion tool at Bioinf @ Bugaco.com. It allows conversion between 16 most popular sequence formats.
Here is direct link to sequence conversion utility
What is really cool is that it supports:
- ace
- embl
- fasta
- fastq
- fastq-solexa
- fastq-illumina
- genbank
- ig
- nexus
- phd
- phylip
- pir
- stockholm
- swiss
- tab
- qual
